ITK-SNAP Video Library

Overviews of new and upcoming features.

Demo/tutorial of new AI-assisted segmentation mode (2025, 15 min)

Demo of rigid/affine registration (2018, <1 min)

Short academic presentations or demos highlighting main ITK-SNAP features.

Overview of main ITK-SNAP segmentation tools in the context of heart valve segmentation. (2020, 57 min)
Presented at the European Society of Biomechanics webinar

RSNA Course: Intro/Manual Segmentation (2016, 17min)

RSNA Course: Automated Segmentation (2016, 5min)

Video protocols for segmentation of specific structures using ITK-SNAP will appear here.

Protocol for brain tumor segmentation from multi-modality MRI from the BRATS 2013 challenge.
(17 min)

Placenta segmentation in 3D ultrasound

Patient CT Mandible Segmentation for 3D Print Tutorial from the Advanced Perioperative Imaging Lab TGH

Airway segmentation in CT from the Advanced Perioperative Imaging Lab TGH

Stroke lesion segmentation in MRI from Dorian Pustina, PICSL lab, UPenn

These videos are from a training course on ITK-SNAP held in Philadelphia in September 2014.

Sessions 0 & 1: Overview of ITK-SNAP 3.2 from the September 2014 course
(4 min)

Session 2: Theory: Working with 3D Medical Images
(21 min)

Session 3: Image Navigation
(34 min)

Session 4: Manual Segmentation
(19 min)

Session 5: Working with Multiple Imaging Modalities
(25 min)

Sessions 6 & 7: Automatic Segmentation
(24 min)

Session 8: 3D Navigation and Editing
(21 min)

Session 9: Convert3D Basics
(21 min)

Overview of ITK-SNAP 3.0 from the August 2013 course (16 min)

Multicomponent image support (1 min)